Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 INTS4P1-201ENST00000438455 1935 ntBASIC12.04□□□□□ -0.48
NUP35Q8NFH5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 AC112907.2-201ENST00000448639 330 ntBASIC12.04□□□□□ -0.48
NUP35Q8NFH5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 AC126365.1-201ENST00000578585 1514 ntBASIC12.04□□□□□ -0.48
NUP35Q8NFH5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AC079781.5-202ENST00000641784 3743 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AL137784.3-201ENST00000623858 2288 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AC148477.4-201ENST00000613430 1793 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 LIN28AP1-201ENST00000429574 405 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ATP5G1P1-201ENST00000448724 379 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 KRT18P38-201ENST00000449496 1282 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 PAWRP1-201ENST00000451083 565 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 VENTXP7-201ENST00000475503 772 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 HYMAI.1-201ENST00000620949 238 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AP001350.2-201ENST00000625104 1094 ntBASIC12.03□□□□□ -0.48
NUP35Q8NFH5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
NUP35Q8NFH5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms