Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 AL589987.1-201ENST00000453380 819 ntBASIC16.32■□□□□ 0.2
CHPFQ8IZ52 POU5F1P6-201ENST00000466990 990 ntBASIC16.32■□□□□ 0.2
CHPFQ8IZ52 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 TIMM17BP1-201ENST00000545713 516 ntBASIC16.32■□□□□ 0.2
CHPFQ8IZ52 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 AC074044.1-201ENST00000609673 707 ntBASIC16.32■□□□□ 0.2
CHPFQ8IZ52 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 MYCLP2-201ENST00000449268 967 ntBASIC16.31■□□□□ 0.2
CHPFQ8IZ52 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 GPR53P-205ENST00000457298 1084 ntBASIC16.31■□□□□ 0.2
CHPFQ8IZ52 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 IGHV3-72-202ENST00000621503 303 ntBASIC16.31■□□□□ 0.2
CHPFQ8IZ52 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHPFQ8IZ52 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 U91328.1-201ENST00000437528 223 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 ATP5G2P4-201ENST00000442175 420 ntBASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHPFQ8IZ52 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms