Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB11FIP4Q86YS3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB11FIP4Q86YS3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB11FIP4Q86YS3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RAB11FIP4Q86YS3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.83■□□□□ 0.61
RAB11FIP4Q86YS3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 AC069262.1-201ENST00000539058 672 ntBASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 AC106028.4-201ENST00000614509 607 ntBASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB11FIP4Q86YS3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 CYP4F24P-201ENST00000586049 1580 ntBASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 AP002414.2-201ENST00000591780 3365 ntBASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB11FIP4Q86YS3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 AL353705.2-201ENST00000428243 662 ntBASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms