Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AC004790.2-201ENST00000623588 572 ntBASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AC129492.6-201ENST00000611383 1305 ntBASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 RNA5SP415-201ENST00000517246 115 ntBASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 UNC93B6-202ENST00000528242 690 ntBASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 AC010654.1-201ENST00000615722 808 ntBASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 TOP3BP1-201ENST00000420768 1380 ntBASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 AC002310.6-201ENST00000624451 1377 ntBASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TMEM53Q6P2H8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 CRYGEP-201ENST00000412192 528 ntBASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 AL590627.1-203ENST00000421194 1026 ntBASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 PRSS29P-201ENST00000440800 595 ntBASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 IGHV3-22-201ENST00000520721 359 ntBASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms