Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 RPS2P32-201ENST00000439199 892 ntBASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC016180.1-201ENST00000567945 403 ntBASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AL391069.4-201ENST00000609583 481 ntBASIC16.93■□□□□ 0.3
VARS2Q5ST30 GAPDHP74-202ENST00000632456 782 ntBASIC16.93■□□□□ 0.3
VARS2Q5ST30 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 CLK3P2-201ENST00000427566 1453 ntBASIC16.93■□□□□ 0.3
VARS2Q5ST30 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 PHKG1P2-201ENST00000457537 863 ntBASIC16.92■□□□□ 0.3
VARS2Q5ST30 RN7SL837P-201ENST00000463010 287 ntBASIC16.92■□□□□ 0.3
VARS2Q5ST30 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 TMEM261P1-201ENST00000604899 340 ntBASIC16.92■□□□□ 0.3
VARS2Q5ST30 AL158212.4-201ENST00000624062 1286 ntBASIC16.92■□□□□ 0.3
VARS2Q5ST30 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARS2Q5ST30 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.92■□□□□ 0.3
VARS2Q5ST30 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 CDC14C-201ENST00000428251 1719 ntBASIC16.91■□□□□ 0.3
VARS2Q5ST30 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 AC104596.2-201ENST00000512793 793 ntBASIC16.91■□□□□ 0.3
VARS2Q5ST30 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 WFDC1-204ENST00000613603 549 ntBASIC16.91■□□□□ 0.3
VARS2Q5ST30 AC133485.6-201ENST00000624045 688 ntBASIC16.91■□□□□ 0.3
VARS2Q5ST30 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms