Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 SSR4P1-203ENST00000599569 2260 ntBASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AL160237.2-201ENST00000556165 472 ntBASIC14.43□□□□□ -0.1
CCDC58Q4VC31 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AL049597.2-201ENST00000565575 961 ntBASIC14.43□□□□□ -0.1
CCDC58Q4VC31 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AL355877.3-201ENST00000622820 899 ntBASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AP000550.4-202ENST00000639755 178 ntBASIC14.43□□□□□ -0.1
CCDC58Q4VC31 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC58Q4VC31 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 LINC00528-201ENST00000600723 2160 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AC009090.5-201ENST00000624886 2285 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AC138894.3-201ENST00000603787 634 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AC007292.2-201ENST00000593524 1812 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms