Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 FO393414.2-201ENST00000405153 598 ntBASIC14.12□□□□□ -0.15
HIST3H3Q16695 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC069262.1-201ENST00000539058 672 ntBASIC14.12□□□□□ -0.15
HIST3H3Q16695 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AL596442.2-201ENST00000610240 980 ntBASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC079781.4-201ENST00000641908 219 ntBASIC14.12□□□□□ -0.15
HIST3H3Q16695 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST3H3Q16695 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST3H3Q16695 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 KRT8P12-202ENST00000472924 1397 ntBASIC14.11□□□□□ -0.15
HIST3H3Q16695 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 AL139400.1-201ENST00000366220 510 ntBASIC14.11□□□□□ -0.15
HIST3H3Q16695 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 HIST3H2BA-201ENST00000436555 524 ntBASIC14.11□□□□□ -0.15
HIST3H3Q16695 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H3Q16695 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST3H3Q16695 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms