Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB1P98172 EMBP1-201ENST00000458200 901 ntBASIC14.32□□□□□ -0.12
EFNB1P98172 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB1P98172 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB1P98172 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB1P98172 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EFNB1P98172 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB1P98172 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB1P98172 AC023141.13-201ENST00000604991 943 ntBASIC14.32□□□□□ -0.12
EFNB1P98172 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.32□□□□□ -0.12
EFNB1P98172 AC012313.10-201ENST00000623509 926 ntBASIC14.32□□□□□ -0.12
EFNB1P98172 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EFNB1P98172 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB1P98172 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB1P98172 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.32□□□□□ -0.12
EFNB1P98172 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
EFNB1P98172 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB1P98172 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB1P98172 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB1P98172 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 MROH4P-201ENST00000431302 1578 ntBASIC14.31□□□□□ -0.12
EFNB1P98172 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 AC023024.2-201ENST00000623561 1993 ntBASIC14.31□□□□□ -0.12
EFNB1P98172 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
EFNB1P98172 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
EFNB1P98172 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB1P98172 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB1P98172 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
EFNB1P98172 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.31□□□□□ -0.12
EFNB1P98172 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNB1P98172 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 AC007064.4-201ENST00000637740 555 ntBASIC14.31□□□□□ -0.12
EFNB1P98172 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 AC148477.4-201ENST00000613430 1793 ntBASIC14.31□□□□□ -0.12
EFNB1P98172 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNB1P98172 ZBED1P1-201ENST00000502364 1930 ntBASIC14.31□□□□□ -0.12
EFNB1P98172 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNB1P98172 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNB1P98172 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.31□□□□□ -0.12
EFNB1P98172 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB1P98172 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB1P98172 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EFNB1P98172 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB1P98172 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNB1P98172 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB1P98172 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB1P98172 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.3□□□□□ -0.12
EFNB1P98172 AC098831.1-202ENST00000438821 336 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms