Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 ADH5P3-201ENST00000433842 1137 ntBASIC16.24■□□□□ 0.19
PRAMEP78395 MKNK2P1-201ENST00000437526 628 ntBASIC16.24■□□□□ 0.19
PRAMEP78395 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 TIMM8BP1-201ENST00000452384 211 ntBASIC16.24■□□□□ 0.19
PRAMEP78395 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
PRAMEP78395 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 AL671883.3-201ENST00000603274 991 ntBASIC16.24■□□□□ 0.19
PRAMEP78395 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
PRAMEP78395 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEP78395 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.23■□□□□ 0.19
PRAMEP78395 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 AP002414.2-201ENST00000591780 3365 ntBASIC16.23■□□□□ 0.19
PRAMEP78395 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PRAMEP78395 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEP78395 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEP78395 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 HTR5BP-201ENST00000430851 1154 ntBASIC16.23■□□□□ 0.19
PRAMEP78395 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.23■□□□□ 0.19
PRAMEP78395 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEP78395 IGHV3-62-201ENST00000520057 340 ntBASIC16.23■□□□□ 0.19
PRAMEP78395 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEP78395 AC024267.1-201ENST00000582320 895 ntBASIC16.23■□□□□ 0.19
PRAMEP78395 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEP78395 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEP78395 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEP78395 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEP78395 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 AL136379.1-201ENST00000623471 2642 ntBASIC16.23■□□□□ 0.19
PRAMEP78395 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PRAMEP78395 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.23■□□□□ 0.19
PRAMEP78395 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEP78395 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms