Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 AC087499.5-201ENST00000452760 1342 ntBASIC11.94□□□□□ -0.5
CMC4P56277 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.94□□□□□ -0.5
CMC4P56277 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.94□□□□□ -0.5
CMC4P56277 PHKG1P2-201ENST00000457537 863 ntBASIC11.94□□□□□ -0.5
CMC4P56277 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.94□□□□□ -0.5
CMC4P56277 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.94□□□□□ -0.5
CMC4P56277 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.94□□□□□ -0.5
CMC4P56277 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 AL133215.2-201ENST00000609242 977 ntBASIC11.94□□□□□ -0.5
CMC4P56277 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.94□□□□□ -0.5
CMC4P56277 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.94□□□□□ -0.5
CMC4P56277 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CMC4P56277 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CMC4P56277 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 AC006449.5-201ENST00000610658 2098 ntBASIC11.93□□□□□ -0.5
CMC4P56277 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CMC4P56277 AC092171.3-201ENST00000610122 2651 ntBASIC11.93□□□□□ -0.5
CMC4P56277 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CMC4P56277 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
CMC4P56277 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.93□□□□□ -0.5
CMC4P56277 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.93□□□□□ -0.5
CMC4P56277 EEF1DP4-201ENST00000446006 880 ntBASIC11.93□□□□□ -0.5
CMC4P56277 RN7SL618P-201ENST00000477850 296 ntBASIC11.93□□□□□ -0.5
CMC4P56277 AC097493.3-201ENST00000509725 367 ntBASIC11.93□□□□□ -0.5
CMC4P56277 SDHAP3-202ENST00000515467 728 ntBASIC11.93□□□□□ -0.5
CMC4P56277 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.93□□□□□ -0.5
CMC4P56277 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.93□□□□□ -0.5
CMC4P56277 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.93□□□□□ -0.5
CMC4P56277 AL450472.2-201ENST00000603663 1156 ntBASIC11.93□□□□□ -0.5
CMC4P56277 AC106028.4-201ENST00000614509 607 ntBASIC11.93□□□□□ -0.5
CMC4P56277 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.93□□□□□ -0.5
CMC4P56277 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.93□□□□□ -0.5
CMC4P56277 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CMC4P56277 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms