Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
GFERP55789 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GFERP55789 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 OR8S1-201ENST00000310194 1080 ntBASIC15.25■□□□□ 0.03
GFERP55789 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GFERP55789 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.25■□□□□ 0.03
GFERP55789 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 RN7SL837P-201ENST00000463010 287 ntBASIC15.25■□□□□ 0.03
GFERP55789 AC011495.1-201ENST00000498085 584 ntBASIC15.25■□□□□ 0.03
GFERP55789 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.25■□□□□ 0.03
GFERP55789 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.25■□□□□ 0.03
GFERP55789 AL391069.4-201ENST00000609583 481 ntBASIC15.25■□□□□ 0.03
GFERP55789 WFDC1-204ENST00000613603 549 ntBASIC15.25■□□□□ 0.03
GFERP55789 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.25■□□□□ 0.03
GFERP55789 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
GFERP55789 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFERP55789 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.24■□□□□ 0.03
GFERP55789 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.24■□□□□ 0.03
GFERP55789 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
GFERP55789 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFERP55789 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GFERP55789 AL596087.1-201ENST00000400979 1969 ntBASIC15.24■□□□□ 0.03
GFERP55789 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
GFERP55789 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.24■□□□□ 0.03
GFERP55789 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GFERP55789 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GFERP55789 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GFERP55789 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.23■□□□□ 0.03
GFERP55789 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.23■□□□□ 0.03
GFERP55789 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFERP55789 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.23■□□□□ 0.03
GFERP55789 MIR648-201ENST00000385046 94 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms