Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 AC112504.1-201ENST00000623415 1841 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ATP1B3P54709 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ATP1B3P54709 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ATP1B3P54709 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 AC069224.1-201ENST00000566372 1715 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.99□□□□□ -0.17
ATP1B3P54709 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.99□□□□□ -0.17
ATP1B3P54709 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.99□□□□□ -0.17
ATP1B3P54709 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 MRPL3P1-201ENST00000400109 1033 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.99□□□□□ -0.17
ATP1B3P54709 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
ATP1B3P54709 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.99□□□□□ -0.17
ATP1B3P54709 AC079776.4-201ENST00000511039 504 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 IGHV3-22-201ENST00000520721 359 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.99□□□□□ -0.17
ATP1B3P54709 KRT126P-201ENST00000549467 1181 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.99□□□□□ -0.17
ATP1B3P54709 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
ATP1B3P54709 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 PCDHA3-202ENST00000532566 4594 ntBASIC13.99□□□□□ -0.17
ATP1B3P54709 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ATP1B3P54709 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
ATP1B3P54709 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ATP1B3P54709 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATP1B3P54709 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 AP005117.1-202ENST00000581724 1908 ntBASIC13.98□□□□□ -0.17
ATP1B3P54709 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.98□□□□□ -0.17
ATP1B3P54709 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ATP1B3P54709 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 TPM4P1-201ENST00000436100 807 ntBASIC13.98□□□□□ -0.17
ATP1B3P54709 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.98□□□□□ -0.17
ATP1B3P54709 AC093724.1-201ENST00000448659 1027 ntBASIC13.98□□□□□ -0.17
ATP1B3P54709 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.98□□□□□ -0.17
ATP1B3P54709 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.98□□□□□ -0.17
ATP1B3P54709 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.98□□□□□ -0.17
ATP1B3P54709 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 AL365330.1-201ENST00000607459 531 ntBASIC13.98□□□□□ -0.17
ATP1B3P54709 Z83851.2-201ENST00000609564 659 ntBASIC13.98□□□□□ -0.17
ATP1B3P54709 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.98□□□□□ -0.17
ATP1B3P54709 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms