Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRIA1P42261 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRIA1P42261 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GRIA1P42261 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GRIA1P42261 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.27■□□□□ 0.19
GRIA1P42261 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 FAM220BP-201ENST00000377689 816 ntBASIC16.26■□□□□ 0.19
GRIA1P42261 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 SLC25A39P2-201ENST00000537614 270 ntBASIC16.26■□□□□ 0.19
GRIA1P42261 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.26■□□□□ 0.19
GRIA1P42261 AC024267.1-201ENST00000582320 895 ntBASIC16.26■□□□□ 0.19
GRIA1P42261 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 AC105250.1-201ENST00000509378 2057 ntBASIC16.26■□□□□ 0.19
GRIA1P42261 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.26■□□□□ 0.19
GRIA1P42261 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA1P42261 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GRIA1P42261 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.25■□□□□ 0.19
GRIA1P42261 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.25■□□□□ 0.19
GRIA1P42261 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.25■□□□□ 0.19
GRIA1P42261 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.25■□□□□ 0.19
GRIA1P42261 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.25■□□□□ 0.19
GRIA1P42261 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.25■□□□□ 0.19
GRIA1P42261 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.25■□□□□ 0.19
GRIA1P42261 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GRIA1P42261 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 REXO1L1P-202ENST00000608646 1974 ntBASIC16.25■□□□□ 0.19
GRIA1P42261 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.25■□□□□ 0.19
GRIA1P42261 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.25■□□□□ 0.19
GRIA1P42261 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.25■□□□□ 0.19
GRIA1P42261 AC090616.6-203ENST00000579186 1945 ntBASIC16.25■□□□□ 0.19
GRIA1P42261 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.25■□□□□ 0.19
GRIA1P42261 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GRIA1P42261 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.24■□□□□ 0.19
GRIA1P42261 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GRIA1P42261 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms