Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.57■□□□□ 0.4
USP8P40818 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 KRT18P58-201ENST00000527480 1120 ntBASIC17.57■□□□□ 0.4
USP8P40818 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.57■□□□□ 0.4
USP8P40818 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP8P40818 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.57■□□□□ 0.4
USP8P40818 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
USP8P40818 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
USP8P40818 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 AC073439.1-201ENST00000624121 1774 ntBASIC17.56■□□□□ 0.4
USP8P40818 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
USP8P40818 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 MIR574-201ENST00000385209 96 ntBASIC17.56■□□□□ 0.4
USP8P40818 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 AC093724.1-201ENST00000448659 1027 ntBASIC17.56■□□□□ 0.4
USP8P40818 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.56■□□□□ 0.4
USP8P40818 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
USP8P40818 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
USP8P40818 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.56■□□□□ 0.4
USP8P40818 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.56■□□□□ 0.4
USP8P40818 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP8P40818 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
USP8P40818 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
USP8P40818 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.55■□□□□ 0.4
USP8P40818 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.55■□□□□ 0.4
USP8P40818 FAM58CP-201ENST00000435741 640 ntBASIC17.55■□□□□ 0.4
USP8P40818 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.55■□□□□ 0.4
USP8P40818 AL603832.2-201ENST00000566195 2125 ntBASIC17.55■□□□□ 0.4
USP8P40818 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.55■□□□□ 0.4
USP8P40818 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.55■□□□□ 0.4
USP8P40818 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
USP8P40818 AC091812.2-201ENST00000619081 385 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms