Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 AC092580.3-201ENST00000430932 139 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 AC241585.1-201ENST00000433527 519 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 AC004890.2-204ENST00000481968 304 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.28□□□□□ -0.12
HOXC12P31275 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.28□□□□□ -0.12
HOXC12P31275 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.28□□□□□ -0.12
HOXC12P31275 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 NKILA-202ENST00000614771 2598 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 FLJ38576-201ENST00000623820 2459 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 AL589702.1-201ENST00000641229 1509 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.27□□□□□ -0.12
HOXC12P31275 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 AC138969.2-201ENST00000532739 9932 ntBASIC14.27□□□□□ -0.12
HOXC12P31275 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.27□□□□□ -0.12
HOXC12P31275 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.27□□□□□ -0.12
HOXC12P31275 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HOXC12P31275 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
HOXC12P31275 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
HOXC12P31275 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HOXC12P31275 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HOXC12P31275 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXC12P31275 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXC12P31275 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.27□□□□□ -0.13
HOXC12P31275 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.27□□□□□ -0.13
HOXC12P31275 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 RN7SL692P-201ENST00000464677 288 ntBASIC14.27□□□□□ -0.13
HOXC12P31275 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.27□□□□□ -0.13
HOXC12P31275 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.27□□□□□ -0.13
HOXC12P31275 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HOXC12P31275 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HOXC12P31275 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXC12P31275 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXC12P31275 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HOXC12P31275 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXC12P31275 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXC12P31275 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HOXC12P31275 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXC12P31275 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXC12P31275 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXC12P31275 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HOXC12P31275 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
HOXC12P31275 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 AL035456.1-201ENST00000456064 1369 ntBASIC14.26□□□□□ -0.13
HOXC12P31275 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HOXC12P31275 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXC12P31275 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HOXC12P31275 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXC12P31275 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HOXC12P31275 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXC12P31275 MRPS18AP1-201ENST00000414458 589 ntBASIC14.26□□□□□ -0.13
HOXC12P31275 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms