Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF1P30408 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 ME2P1-201ENST00000426028 1970 ntBASIC19.62■□□□□ 0.73
TM4SF1P30408 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF1P30408 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF1P30408 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TM4SF1P30408 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 AL138799.1-201ENST00000448213 1675 ntBASIC19.62■□□□□ 0.73
TM4SF1P30408 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF1P30408 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TM4SF1P30408 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF1P30408 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 KRT8P35-201ENST00000483942 1338 ntBASIC19.61■□□□□ 0.73
TM4SF1P30408 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF1P30408 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF1P30408 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 AL662890.1-201ENST00000396818 632 ntBASIC19.61■□□□□ 0.73
TM4SF1P30408 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF1P30408 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF1P30408 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF1P30408 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.61■□□□□ 0.73
TM4SF1P30408 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.61■□□□□ 0.73
TM4SF1P30408 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.61■□□□□ 0.73
TM4SF1P30408 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 CHMP4BP1-201ENST00000556017 588 ntBASIC19.61■□□□□ 0.73
TM4SF1P30408 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF1P30408 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TM4SF1P30408 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF1P30408 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF1P30408 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF1P30408 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TM4SF1P30408 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF1P30408 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TM4SF1P30408 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
TM4SF1P30408 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF1P30408 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF1P30408 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TM4SF1P30408 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.6■□□□□ 0.73
TM4SF1P30408 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.6■□□□□ 0.73
TM4SF1P30408 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF1P30408 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF1P30408 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF1P30408 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.6■□□□□ 0.73
TM4SF1P30408 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TM4SF1P30408 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TM4SF1P30408 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF1P30408 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF1P30408 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 AC012313.1-201ENST00000593393 3059 ntBASIC19.59■□□□□ 0.73
TM4SF1P30408 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.59■□□□□ 0.73
TM4SF1P30408 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TM4SF1P30408 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.59■□□□□ 0.73
TM4SF1P30408 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
TM4SF1P30408 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.59■□□□□ 0.73
TM4SF1P30408 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.59■□□□□ 0.73
TM4SF1P30408 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF1P30408 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF1P30408 AC020914.3-201ENST00000594712 304 ntBASIC19.59■□□□□ 0.73
TM4SF1P30408 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF1P30408 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
TM4SF1P30408 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.59■□□□□ 0.73
TM4SF1P30408 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.59■□□□□ 0.73
TM4SF1P30408 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.59■□□□□ 0.73
TM4SF1P30408 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF1P30408 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF1P30408 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms