Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ERCC3P19447 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.57■□□□□ 0.56
ERCC3P19447 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC3P19447 HLA-V-201ENST00000429037 534 ntBASIC18.57■□□□□ 0.56
ERCC3P19447 MYCLP2-201ENST00000449268 967 ntBASIC18.57■□□□□ 0.56
ERCC3P19447 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC3P19447 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.57■□□□□ 0.56
ERCC3P19447 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
ERCC3P19447 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC3P19447 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.57■□□□□ 0.56
ERCC3P19447 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ERCC3P19447 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ERCC3P19447 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC3P19447 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ERCC3P19447 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.57■□□□□ 0.56
ERCC3P19447 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 PCGF3-213ENST00000620529 1899 ntBASIC18.56■□□□□ 0.56
ERCC3P19447 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 AC079776.1-201ENST00000401540 1152 ntBASIC18.56■□□□□ 0.56
ERCC3P19447 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 MEP1AP4-201ENST00000423244 1087 ntBASIC18.56■□□□□ 0.56
ERCC3P19447 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 AL162274.1-201ENST00000617191 1098 ntBASIC18.56■□□□□ 0.56
ERCC3P19447 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC3P19447 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ERCC3P19447 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC3P19447 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ERCC3P19447 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC3P19447 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 AC005622.1-201ENST00000636801 1703 ntBASIC18.55■□□□□ 0.56
ERCC3P19447 ALOX12P2-203ENST00000570921 1945 ntBASIC18.55■□□□□ 0.56
ERCC3P19447 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC3P19447 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 ELK1P1-201ENST00000485699 580 ntBASIC18.55■□□□□ 0.56
ERCC3P19447 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.55■□□□□ 0.56
ERCC3P19447 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.55■□□□□ 0.56
ERCC3P19447 AC123567.1-201ENST00000548294 1261 ntBASIC18.55■□□□□ 0.56
ERCC3P19447 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ERCC3P19447 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC3P19447 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.55■□□□□ 0.56
ERCC3P19447 CTBP2P3-201ENST00000585629 1255 ntBASIC18.55■□□□□ 0.56
ERCC3P19447 AC099568.2-201ENST00000609194 695 ntBASIC18.55■□□□□ 0.56
ERCC3P19447 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC3P19447 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC3P19447 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ERCC3P19447 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC3P19447 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ERCC3P19447 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC3P19447 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms