Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL3L1P16619 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL3L1P16619 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 AP001282.1-201ENST00000531301 1499 ntBASIC13.25□□□□□ -0.29
CCL3L1P16619 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL3L1P16619 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL3L1P16619 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL3L1P16619 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL3L1P16619 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL3L1P16619 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 AC106028.4-201ENST00000614509 607 ntBASIC13.25□□□□□ -0.29
CCL3L1P16619 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCL3L1P16619 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 AC112504.1-201ENST00000623415 1841 ntBASIC13.25□□□□□ -0.29
CCL3L1P16619 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL3L1P16619 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL3L1P16619 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL3L1P16619 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 BNIP3P1-202ENST00000550043 1585 ntBASIC13.24□□□□□ -0.29
CCL3L1P16619 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 AL035456.1-201ENST00000456064 1369 ntBASIC13.24□□□□□ -0.29
CCL3L1P16619 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL3L1P16619 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.24□□□□□ -0.29
CCL3L1P16619 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 KLF2P3-201ENST00000451977 1087 ntBASIC13.24□□□□□ -0.29
CCL3L1P16619 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL3L1P16619 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL3L1P16619 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 AC132872.4-202ENST00000622924 2756 ntBASIC13.24□□□□□ -0.29
CCL3L1P16619 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL3L1P16619 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL3L1P16619 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL3L1P16619 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL3L1P16619 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL3L1P16619 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL3L1P16619 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL3L1P16619 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms