Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
FAM228BP0C875 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
FAM228BP0C875 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.11■□□□□ 0.33
FAM228BP0C875 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
FAM228BP0C875 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FAM228BP0C875 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
FAM228BP0C875 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM228BP0C875 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 LINC02228-204ENST00000642115 2962 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 REXO1L1P-202ENST00000608646 1974 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 AL355306.1-201ENST00000415580 579 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 AC142381.1-201ENST00000426099 345 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 FDX1P1-201ENST00000449115 551 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM228BP0C875 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 AC243562.2-201ENST00000561247 970 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM228BP0C875 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 AC024267.1-201ENST00000582320 895 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 AC027307.2-201ENST00000591252 911 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 AC140113.2-201ENST00000604370 208 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM228BP0C875 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 AKAP8P1-201ENST00000434743 1349 ntBASIC17.1■□□□□ 0.33
FAM228BP0C875 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FAM228BP0C875 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FAM228BP0C875 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM228BP0C875 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM228BP0C875 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM228BP0C875 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM228BP0C875 C18orf15-201ENST00000623680 2534 ntBASIC17.09■□□□□ 0.33
FAM228BP0C875 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM228BP0C875 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
FAM228BP0C875 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM228BP0C875 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.09■□□□□ 0.33
FAM228BP0C875 RNA5SP416-201ENST00000516838 111 ntBASIC17.09■□□□□ 0.33
FAM228BP0C875 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.09■□□□□ 0.33
FAM228BP0C875 AL135744.1-201ENST00000565098 629 ntBASIC17.09■□□□□ 0.33
FAM228BP0C875 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.09■□□□□ 0.33
FAM228BP0C875 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM228BP0C875 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.09■□□□□ 0.33
FAM228BP0C875 AC091812.2-201ENST00000619081 385 ntBASIC17.09■□□□□ 0.33
FAM228BP0C875 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM228BP0C875 ZNF259P1-201ENST00000407656 1365 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms