Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TOP3BO95985 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TOP3BO95985 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.49■□□□□ 0.23
TOP3BO95985 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.49■□□□□ 0.23
TOP3BO95985 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 AC069120.2-201ENST00000524091 540 ntBASIC16.49■□□□□ 0.23
TOP3BO95985 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
TOP3BO95985 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.49■□□□□ 0.23
TOP3BO95985 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TOP3BO95985 AC010336.2-201ENST00000564226 506 ntBASIC16.49■□□□□ 0.23
TOP3BO95985 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.49■□□□□ 0.23
TOP3BO95985 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.49■□□□□ 0.23
TOP3BO95985 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.49■□□□□ 0.23
TOP3BO95985 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TOP3BO95985 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TOP3BO95985 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
TOP3BO95985 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
TOP3BO95985 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 AC023824.1-201ENST00000562945 2975 ntBASIC16.48■□□□□ 0.23
TOP3BO95985 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.48■□□□□ 0.23
TOP3BO95985 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TOP3BO95985 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TOP3BO95985 AC004890.2-204ENST00000481968 304 ntBASIC16.48■□□□□ 0.23
TOP3BO95985 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TOP3BO95985 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.48■□□□□ 0.23
TOP3BO95985 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.48■□□□□ 0.23
TOP3BO95985 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
TOP3BO95985 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.48■□□□□ 0.23
TOP3BO95985 UXT-AS1-201ENST00000590504 1525 ntBASIC16.48■□□□□ 0.23
TOP3BO95985 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.48■□□□□ 0.23
TOP3BO95985 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.48■□□□□ 0.23
TOP3BO95985 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TOP3BO95985 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TOP3BO95985 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.48■□□□□ 0.23
TOP3BO95985 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.47■□□□□ 0.23
TOP3BO95985 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.47■□□□□ 0.23
TOP3BO95985 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TOP3BO95985 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.47■□□□□ 0.23
TOP3BO95985 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TOP3BO95985 AC140658.5-201ENST00000438532 169 ntBASIC16.47■□□□□ 0.23
TOP3BO95985 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 RN7SL589P-201ENST00000481268 310 ntBASIC16.47■□□□□ 0.23
TOP3BO95985 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.47■□□□□ 0.23
TOP3BO95985 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
TOP3BO95985 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.47■□□□□ 0.23
TOP3BO95985 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.47■□□□□ 0.23
TOP3BO95985 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms