Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GGPS1O95749 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GGPS1O95749 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GGPS1O95749 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
GGPS1O95749 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GGPS1O95749 AC134407.2-201ENST00000625089 1978 ntBASIC17.93■□□□□ 0.46
GGPS1O95749 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
GGPS1O95749 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
GGPS1O95749 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 HAUS4P1-201ENST00000406739 1145 ntBASIC17.93■□□□□ 0.46
GGPS1O95749 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.93■□□□□ 0.46
GGPS1O95749 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GGPS1O95749 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.93■□□□□ 0.46
GGPS1O95749 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
GGPS1O95749 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.93■□□□□ 0.46
GGPS1O95749 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GGPS1O95749 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GGPS1O95749 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GGPS1O95749 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GGPS1O95749 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GGPS1O95749 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.92■□□□□ 0.46
GGPS1O95749 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.92■□□□□ 0.46
GGPS1O95749 AC074338.1-201ENST00000416825 156 ntBASIC17.92■□□□□ 0.46
GGPS1O95749 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 RPL13P2-201ENST00000440687 659 ntBASIC17.92■□□□□ 0.46
GGPS1O95749 TARDBPP1-201ENST00000442013 1203 ntBASIC17.92■□□□□ 0.46
GGPS1O95749 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.92■□□□□ 0.46
GGPS1O95749 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.92■□□□□ 0.46
GGPS1O95749 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 MIR8072-201ENST00000614241 80 ntBASIC17.92■□□□□ 0.46
GGPS1O95749 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GGPS1O95749 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
GGPS1O95749 AP001282.1-201ENST00000531301 1499 ntBASIC17.92■□□□□ 0.46
GGPS1O95749 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.92■□□□□ 0.46
GGPS1O95749 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GGPS1O95749 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 AC026691.1-201ENST00000602502 2017 ntBASIC17.91■□□□□ 0.46
GGPS1O95749 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GGPS1O95749 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.91■□□□□ 0.46
GGPS1O95749 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GGPS1O95749 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.91■□□□□ 0.46
GGPS1O95749 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms