Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UPK1BO75841 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UPK1BO75841 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1BO75841 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UPK1BO75841 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1BO75841 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14□□□□□ -0.17
UPK1BO75841 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 RPS2P55-201ENST00000397318 883 ntBASIC14□□□□□ -0.17
UPK1BO75841 AP000523.1-201ENST00000398242 1049 ntBASIC14□□□□□ -0.17
UPK1BO75841 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14□□□□□ -0.17
UPK1BO75841 AL512604.3-201ENST00000569583 964 ntBASIC14□□□□□ -0.17
UPK1BO75841 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14□□□□□ -0.17
UPK1BO75841 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14□□□□□ -0.17
UPK1BO75841 ILF3-AS1-201ENST00000591501 1983 ntBASIC14□□□□□ -0.17
UPK1BO75841 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 AC097359.2-201ENST00000604992 2389 ntBASIC14□□□□□ -0.17
UPK1BO75841 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK1BO75841 AC067750.1-201ENST00000608826 6545 ntBASIC13.99□□□□□ -0.17
UPK1BO75841 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
UPK1BO75841 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1BO75841 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1BO75841 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 AC011474.4-201ENST00000623523 2076 ntBASIC13.99□□□□□ -0.17
UPK1BO75841 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1BO75841 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1BO75841 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1BO75841 C1QBPP2-201ENST00000528754 825 ntBASIC13.99□□□□□ -0.17
UPK1BO75841 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
UPK1BO75841 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1BO75841 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1BO75841 AC073592.5-201ENST00000624854 528 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms