Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
O00370 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
O00370 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
O00370 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
O00370 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.12■□□□□ 0.33
O00370 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.12■□□□□ 0.33
O00370 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.12■□□□□ 0.33
O00370 AC092183.1-201ENST00000469884 875 ntBASIC17.12■□□□□ 0.33
O00370 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.12■□□□□ 0.33
O00370 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.12■□□□□ 0.33
O00370 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.12■□□□□ 0.33
O00370 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.12■□□□□ 0.33
O00370 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.12■□□□□ 0.33
O00370 AC105021.1-202ENST00000570572 669 ntBASIC17.12■□□□□ 0.33
O00370 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.12■□□□□ 0.33
O00370 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 AC126177.1-201ENST00000547829 2218 ntBASIC17.12■□□□□ 0.33
O00370 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
O00370 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 AL691432.1-201ENST00000596308 1422 ntBASIC17.12■□□□□ 0.33
O00370 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
O00370 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.12■□□□□ 0.33
O00370 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
O00370 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
O00370 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
O00370 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.11■□□□□ 0.33
O00370 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.11■□□□□ 0.33
O00370 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.11■□□□□ 0.33
O00370 AC025678.2-201ENST00000562061 970 ntBASIC17.11■□□□□ 0.33
O00370 AC004449.1-201ENST00000564240 433 ntBASIC17.11■□□□□ 0.33
O00370 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.11■□□□□ 0.33
O00370 AC015911.4-201ENST00000588022 1070 ntBASIC17.11■□□□□ 0.33
O00370 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.11■□□□□ 0.33
O00370 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.11■□□□□ 0.33
O00370 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 AP001282.1-201ENST00000531301 1499 ntBASIC17.11■□□□□ 0.33
O00370 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
O00370 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
O00370 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
O00370 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
O00370 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.1■□□□□ 0.33
O00370 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
O00370 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.1■□□□□ 0.33
O00370 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
O00370 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.1■□□□□ 0.33
O00370 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 AL139010.1-201ENST00000454878 894 ntBASIC17.1■□□□□ 0.33
O00370 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
O00370 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.1■□□□□ 0.33
O00370 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.1■□□□□ 0.33
O00370 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.1■□□□□ 0.33
O00370 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.1■□□□□ 0.33
O00370 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.1■□□□□ 0.33
O00370 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.1■□□□□ 0.33
O00370 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
O00370 AC026979.3-201ENST00000607315 403 ntBASIC17.1■□□□□ 0.33
O00370 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.1■□□□□ 0.33
O00370 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.1■□□□□ 0.33
O00370 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms