Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 AL031055.1-201ENST00000606362 631 ntBASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 PMS2P4-201ENST00000412466 1052 ntBASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 SART3-203ENST00000546611 1184 ntBASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 MIR4313-201ENST00000580760 101 ntBASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 MIR4515-201ENST00000584082 81 ntBASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 MTDHP3-201ENST00000594186 672 ntBASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV3S1A0A5B6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 AC005840.4-201ENST00000541242 2494 ntBASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 GPX1P2-201ENST00000429271 606 ntBASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 DUSP5P1-201ENST00000441325 1139 ntBASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.02■□□□□ -0
TCRBV3S1A0A5B6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.02□□□□□ -0.01
TCRBV3S1A0A5B6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms