Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CYP46A1Q9Y6A2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 AC022532.1-201ENST00000624563 1728 ntBASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 HLA-H-201ENST00000383620 1096 ntBASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 ALG1L5P-201ENST00000482043 771 ntBASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 AC073347.1-201ENST00000421633 2643 ntBASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP46A1Q9Y6A2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 TSPY26P-202ENST00000565928 3884 ntBASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AL592309.1-201ENST00000443127 649 ntBASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AC020658.6-201ENST00000623564 1870 ntBASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AC084121.4-201ENST00000641598 221 ntBASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AF228730.8-201ENST00000642140 221 ntBASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 UXT-AS1-201ENST00000590504 1525 ntBASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP46A1Q9Y6A2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms