Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 HAUS4P1-201ENST00000406739 1145 ntBASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB7Q9Y5E2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 ANKRD19P-201ENST00000338192 862 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 SOCS2P1-201ENST00000417727 557 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 KRT18P64-201ENST00000434946 1219 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 KLF2P4-201ENST00000451959 1225 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 BNIP3P42-201ENST00000454982 569 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 SLED1-202ENST00000512051 380 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 BNIP3P29-201ENST00000598302 571 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 AL450472.2-201ENST00000603663 1156 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 AC011447.5-201ENST00000616168 564 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 AC005052.1-201ENST00000625181 2492 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 REXO1L6P-201ENST00000603433 1515 ntBASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB7Q9Y5E2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 CTBP2P5-201ENST00000454986 1264 ntBASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 PTP4A1P2-201ENST00000546033 454 ntBASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 PDIA3P1-201ENST00000471856 1510 ntBASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB7Q9Y5E2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms