Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AC055876.3-201ENST00000431496 288 ntBASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 SERBP1P3-201ENST00000459980 809 ntBASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 HNRNPUP1-201ENST00000554987 333 ntBASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AL390955.2-201ENST00000603032 514 ntBASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AC138649.4-201ENST00000612222 287 ntBASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AC100757.3-201ENST00000622361 1406 ntBASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 CYMP-203ENST00000474680 1263 ntBASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AC027796.2-201ENST00000575326 344 ntBASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 MIR4313-201ENST00000580760 101 ntBASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AC097359.3-201ENST00000603982 1210 ntBASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 MIR6069-201ENST00000620069 79 ntBASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 AL590560.3-201ENST00000623350 461 ntBASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHA4Q9UN74 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHA4Q9UN74 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHA4Q9UN74 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHA4Q9UN74 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 IGHV3-42-201ENST00000520410 361 ntBASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 AL512361.1-201ENST00000554200 418 ntBASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 AP003680.1-201ENST00000598970 3660 ntBASIC18.26■□□□□ 0.51
PCDHA4Q9UN74 PRAL-201ENST00000624952 3286 ntBASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms