Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT11Q9UKZ1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 AL353732.1-201ENST00000569618 1459 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MIR3687-2-201ENST00000577708 61 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 AC091167.2-201ENST00000579581 588 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MIR4515-201ENST00000584082 81 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MIR3687-1-201ENST00000614492 61 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 AL359258.3-201ENST00000622910 2331 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 AL645728.2-201ENST00000641974 660 ntBASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT11Q9UKZ1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 PCGF3-213ENST00000620529 1899 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 KRT8P39-201ENST00000396270 1433 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 AC106881.1-201ENST00000605849 3329 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 MIR1233-2-201ENST00000408138 82 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 MIR1233-1-201ENST00000408722 82 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 AC139530.3-201ENST00000620344 690 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 C20orf181-201ENST00000623918 480 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms