Protein–RNA interactions for Protein: Q9NZC3

GDE1, Glycerophosphodiester phosphodiesterase 1, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1Q9NZC3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 AC020907.1-201ENST00000616460 1350 ntBASIC16.33■□□□□ 0.2
GDE1Q9NZC3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDE1Q9NZC3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 PFN1P12-201ENST00000455938 534 ntBASIC16.32■□□□□ 0.2
GDE1Q9NZC3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 RHOXF1P1-202ENST00000635473 501 ntBASIC16.32■□□□□ 0.2
GDE1Q9NZC3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 AC106820.2-201ENST00000563775 3264 ntBASIC16.32■□□□□ 0.2
GDE1Q9NZC3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GDE1Q9NZC3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 C2orf27AP3-201ENST00000434123 579 ntBASIC16.31■□□□□ 0.2
GDE1Q9NZC3 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 AL354718.3-201ENST00000616414 581 ntBASIC16.31■□□□□ 0.2
GDE1Q9NZC3 GPR182-203ENST00000622922 591 ntBASIC16.31■□□□□ 0.2
GDE1Q9NZC3 CR382287.1-201ENST00000623954 586 ntBASIC16.31■□□□□ 0.2
GDE1Q9NZC3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDE1Q9NZC3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 FZD10-202ENST00000539839 3282 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AL607033.1-201ENST00000623900 1599 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms