Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 IGHV3-71-201ENST00000523324 359 ntBASIC16.62■□□□□ 0.25
HPS4Q9NQG7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 AC005915.1-201ENST00000624912 2018 ntBASIC16.62■□□□□ 0.25
HPS4Q9NQG7 AL136982.4-201ENST00000437689 1740 ntBASIC16.62■□□□□ 0.25
HPS4Q9NQG7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS4Q9NQG7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 U82695.1-201ENST00000635752 1889 ntBASIC16.61■□□□□ 0.25
HPS4Q9NQG7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 MIR6752-201ENST00000618442 71 ntBASIC16.61■□□□□ 0.25
HPS4Q9NQG7 PCDH8P1-201ENST00000428983 2773 ntBASIC16.61■□□□□ 0.25
HPS4Q9NQG7 GGT3P-204ENST00000453783 1664 ntBASIC16.61■□□□□ 0.25
HPS4Q9NQG7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 CICP6-201ENST00000457191 2729 ntBASIC16.61■□□□□ 0.25
HPS4Q9NQG7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HPS4Q9NQG7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 AC079776.1-201ENST00000401540 1152 ntBASIC16.6■□□□□ 0.25
HPS4Q9NQG7 AC098850.1-201ENST00000419919 790 ntBASIC16.6■□□□□ 0.25
HPS4Q9NQG7 HIST3H2BA-201ENST00000436555 524 ntBASIC16.6■□□□□ 0.25
HPS4Q9NQG7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 MIR4321-201ENST00000592276 80 ntBASIC16.6■□□□□ 0.25
HPS4Q9NQG7 AC099568.2-201ENST00000609194 695 ntBASIC16.6■□□□□ 0.25
HPS4Q9NQG7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS4Q9NQG7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms