Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 HAUS4P1-201ENST00000406739 1145 ntBASIC18.65■□□□□ 0.58
SH2D4AQ9H788 AZGP1P1-201ENST00000411909 902 ntBASIC18.65■□□□□ 0.58
SH2D4AQ9H788 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4AQ9H788 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SH2D4AQ9H788 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.64■□□□□ 0.58
SH2D4AQ9H788 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SH2D4AQ9H788 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SH2D4AQ9H788 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.64■□□□□ 0.58
SH2D4AQ9H788 BNIP3P1-202ENST00000550043 1585 ntBASIC18.64■□□□□ 0.58
SH2D4AQ9H788 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 GPR53P-205ENST00000457298 1084 ntBASIC18.64■□□□□ 0.57
SH2D4AQ9H788 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 IGHV3-72-202ENST00000621503 303 ntBASIC18.64■□□□□ 0.57
SH2D4AQ9H788 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4AQ9H788 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 ELK1P1-201ENST00000485699 580 ntBASIC18.63■□□□□ 0.57
SH2D4AQ9H788 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 TMEM261P1-201ENST00000604899 340 ntBASIC18.63■□□□□ 0.57
SH2D4AQ9H788 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4AQ9H788 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AC036164.1-201ENST00000570544 333 ntBASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms