Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 AC104982.3-201ENST00000581995 514 ntBASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 BX539320.1-201ENST00000623759 877 ntBASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTNAP4Q9C0A0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AC018735.1-201ENST00000437208 1502 ntBASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AC018892.3-201ENST00000623986 2499 ntBASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP4Q9C0A0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 MIR663B-201ENST00000408361 115 ntBASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AC020914.3-201ENST00000594712 304 ntBASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.85■□□□□ 0.77
CNTNAP4Q9C0A0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNTNAP4Q9C0A0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms