Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 FAM86C2P-203ENST00000528684 1004 ntBASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 HNRNPUP1-201ENST00000554987 333 ntBASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 AC093520.2-201ENST00000561830 333 ntBASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 AC040169.1-201ENST00000565382 521 ntBASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 C20orf181-201ENST00000623918 480 ntBASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SPDYE11-202ENST00000450699 704 ntBASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SPDYE9P-201ENST00000570642 692 ntBASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SPDYE10P-202ENST00000612005 668 ntBASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 SPDYE8P-202ENST00000612377 668 ntBASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 KRT8P44-201ENST00000441609 1350 ntBASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.69□□□□□ -0.06
RSPO3Q9BXY4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 KRT8P37-201ENST00000451609 1420 ntBASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.68□□□□□ -0.06
RSPO3Q9BXY4 HTR5BP-201ENST00000430851 1154 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms