Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 AC105020.1-201ENST00000435356 2205 ntBASIC18.13■□□□□ 0.49
PTPN18Q99952 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN18Q99952 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN18Q99952 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN18Q99952 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN18Q99952 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN18Q99952 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN18Q99952 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 IMP3P2-201ENST00000489760 475 ntBASIC18.12■□□□□ 0.49
PTPN18Q99952 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.12■□□□□ 0.49
PTPN18Q99952 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN18Q99952 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN18Q99952 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN18Q99952 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN18Q99952 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN18Q99952 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PTPN18Q99952 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTPN18Q99952 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN18Q99952 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN18Q99952 CD8B2-202ENST00000417670 633 ntBASIC18.11■□□□□ 0.49
PTPN18Q99952 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.11■□□□□ 0.49
PTPN18Q99952 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.11■□□□□ 0.49
PTPN18Q99952 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN18Q99952 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.11■□□□□ 0.49
PTPN18Q99952 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN18Q99952 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.11■□□□□ 0.49
PTPN18Q99952 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.11■□□□□ 0.49
PTPN18Q99952 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN18Q99952 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN18Q99952 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN18Q99952 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN18Q99952 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN18Q99952 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN18Q99952 AL133373.2-201ENST00000623187 2828 ntBASIC18.11■□□□□ 0.49
PTPN18Q99952 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 AC078925.2-201ENST00000624013 1973 ntBASIC18.1■□□□□ 0.49
PTPN18Q99952 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN18Q99952 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 KRT8P35-201ENST00000483942 1338 ntBASIC18.1■□□□□ 0.49
PTPN18Q99952 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PTPN18Q99952 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.1■□□□□ 0.49
PTPN18Q99952 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 KRT18P25-201ENST00000508931 1278 ntBASIC18.1■□□□□ 0.49
PTPN18Q99952 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.1■□□□□ 0.49
PTPN18Q99952 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 MIR5572-201ENST00000583188 137 ntBASIC18.1■□□□□ 0.49
PTPN18Q99952 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN18Q99952 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN18Q99952 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 SPCS2P2-201ENST00000603270 608 ntBASIC18.1■□□□□ 0.49
PTPN18Q99952 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN18Q99952 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PTPN18Q99952 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPN18Q99952 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN18Q99952 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN18Q99952 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 AP001282.1-201ENST00000531301 1499 ntBASIC18.09■□□□□ 0.49
PTPN18Q99952 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms