Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC023310.1-201ENST00000554836 735 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC025181.2-201ENST00000606994 802 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AL603756.1-201ENST00000606511 2163 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC006277.1-201ENST00000624348 1610 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC125604.1-201ENST00000496255 707 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 CTBP2P4-201ENST00000513884 920 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC078819.1-201ENST00000547454 765 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC012085.1-201ENST00000548270 765 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 EIF5AP2-201ENST00000585668 1047 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 AC018695.7-201ENST00000624587 2492 ntBASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 AL645939.5-201ENST00000606834 243 ntBASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 GGT4P-201ENST00000623672 1708 ntBASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 AC009084.3-201ENST00000623356 437 ntBASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 AC116353.5-201ENST00000638148 1699 ntBASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD1Q96PZ7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 SERPINA13P-202ENST00000478994 924 ntBASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms