Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 AC067750.1-201ENST00000608826 6545 ntBASIC14.06□□□□□ -0.16
CPNE2Q96FN4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AC126177.1-201ENST00000547829 2218 ntBASIC14.05□□□□□ -0.16
CPNE2Q96FN4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AL513480.1-201ENST00000451731 511 ntBASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AC018712.1-201ENST00000455767 687 ntBASIC14.05□□□□□ -0.16
CPNE2Q96FN4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 CLEC4GP1-201ENST00000596555 870 ntBASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AL121912.1-201ENST00000603683 238 ntBASIC14.05□□□□□ -0.16
CPNE2Q96FN4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE2Q96FN4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 KRT18P34-201ENST00000488218 1270 ntBASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 ACTL9-202ENST00000612068 1252 ntBASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AC004790.2-201ENST00000623588 572 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms