Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
APH1AQ96BI3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
APH1AQ96BI3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APH1AQ96BI3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
APH1AQ96BI3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.25□□□□□ -0.13
APH1AQ96BI3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.25□□□□□ -0.13
APH1AQ96BI3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APH1AQ96BI3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.25□□□□□ -0.13
APH1AQ96BI3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AL691432.1-201ENST00000596308 1422 ntBASIC14.24□□□□□ -0.13
APH1AQ96BI3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.24□□□□□ -0.13
APH1AQ96BI3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 SERBP1P3-201ENST00000459980 809 ntBASIC14.24□□□□□ -0.13
APH1AQ96BI3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 RNA5SP421-201ENST00000516864 134 ntBASIC14.24□□□□□ -0.13
APH1AQ96BI3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.24□□□□□ -0.13
APH1AQ96BI3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 AL136982.4-201ENST00000437689 1740 ntBASIC14.24□□□□□ -0.13
APH1AQ96BI3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
APH1AQ96BI3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APH1AQ96BI3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 AC092580.3-201ENST00000430932 139 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 AC241585.1-201ENST00000433527 519 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 AL512638.1-201ENST00000457493 794 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 AC005498.2-205ENST00000593218 784 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 AC011467.4-201ENST00000594891 528 ntBASIC14.23□□□□□ -0.13
APH1AQ96BI3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms