Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNA5SP410-201ENST00000516285 106 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 AC012645.4-201ENST00000610691 1061 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 AL139011.1-202ENST00000642063 584 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 AC005052.1-201ENST00000625181 2492 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
ATP2A3Q93084 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A3Q93084 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.96■□□□□ 0.3
ATP2A3Q93084 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A3Q93084 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP2A3Q93084 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 CETN4P-206ENST00000642099 2168 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 SNX33P1-201ENST00000592116 1762 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 MRPS18AP1-201ENST00000414458 589 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC005034.1-201ENST00000426657 489 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 HLA-J-202ENST00000469281 1241 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 SERBP1P5-201ENST00000510079 1181 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC005225.4-201ENST00000557330 545 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC027307.3-201ENST00000594262 1100 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 AL035252.4-201ENST00000624174 288 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC126755.1-201ENST00000525846 6405 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 AC063926.2-201ENST00000623766 1308 ntBASIC16.95■□□□□ 0.3
ATP2A3Q93084 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A3Q93084 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 AC022188.1-201ENST00000620960 1664 ntBASIC16.94■□□□□ 0.3
ATP2A3Q93084 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A3Q93084 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 MTND6P24-201ENST00000440466 518 ntBASIC16.94■□□□□ 0.3
ATP2A3Q93084 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP2A3Q93084 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms