Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 KRT18P13-201ENST00000400056 1290 ntBASIC18.9■□□□□ 0.62
BRF1Q92994 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF1Q92994 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF1Q92994 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF1Q92994 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.9■□□□□ 0.62
BRF1Q92994 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.9■□□□□ 0.62
BRF1Q92994 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 AC009093.7-201ENST00000623853 1223 ntBASIC18.9■□□□□ 0.62
BRF1Q92994 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.9■□□□□ 0.62
BRF1Q92994 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BRF1Q92994 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF1Q92994 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF1Q92994 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BRF1Q92994 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF1Q92994 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRF1Q92994 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF1Q92994 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BRF1Q92994 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.89■□□□□ 0.61
BRF1Q92994 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.89■□□□□ 0.61
BRF1Q92994 SPDYE14P-201ENST00000442619 822 ntBASIC18.89■□□□□ 0.61
BRF1Q92994 AP006288.1-201ENST00000446065 395 ntBASIC18.89■□□□□ 0.61
BRF1Q92994 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
BRF1Q92994 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.89■□□□□ 0.61
BRF1Q92994 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.89■□□□□ 0.61
BRF1Q92994 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRF1Q92994 CYP4F24P-201ENST00000586049 1580 ntBASIC18.89■□□□□ 0.61
BRF1Q92994 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
BRF1Q92994 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.89■□□□□ 0.61
BRF1Q92994 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BRF1Q92994 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF1Q92994 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF1Q92994 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.88■□□□□ 0.61
BRF1Q92994 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 AC254562.1-201ENST00000417586 456 ntBASIC18.88■□□□□ 0.61
BRF1Q92994 AL139010.1-201ENST00000454878 894 ntBASIC18.88■□□□□ 0.61
BRF1Q92994 AC023141.5-201ENST00000458585 616 ntBASIC18.88■□□□□ 0.61
BRF1Q92994 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.88■□□□□ 0.61
BRF1Q92994 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.88■□□□□ 0.61
BRF1Q92994 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BRF1Q92994 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
BRF1Q92994 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BRF1Q92994 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.88■□□□□ 0.61
BRF1Q92994 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.88■□□□□ 0.61
BRF1Q92994 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.88■□□□□ 0.61
BRF1Q92994 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRF1Q92994 AC092850.2-201ENST00000623821 2697 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 AC092384.3-202ENST00000564646 2873 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 AC004987.2-201ENST00000395959 1148 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms