Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AC112504.1-201ENST00000623415 1841 ntBASIC15.74■□□□□ 0.11
ATL1Q8WXF7 UPF3AP3-201ENST00000420996 769 ntBASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AC005237.2-201ENST00000434368 219 ntBASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AC022145.2-201ENST00000598203 171 ntBASIC15.74■□□□□ 0.11
ATL1Q8WXF7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATL1Q8WXF7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 RPSAP43-201ENST00000402237 625 ntBASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AC069335.1-201ENST00000489972 472 ntBASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AP000344.2-201ENST00000512987 629 ntBASIC15.73■□□□□ 0.11
ATL1Q8WXF7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AC243562.2-201ENST00000561247 970 ntBASIC15.73■□□□□ 0.11
ATL1Q8WXF7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AC010327.4-202ENST00000591484 748 ntBASIC15.73■□□□□ 0.11
ATL1Q8WXF7 AL513210.1-201ENST00000629608 234 ntBASIC15.73■□□□□ 0.11
ATL1Q8WXF7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATL1Q8WXF7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 AC011477.6-201ENST00000604980 1927 ntBASIC15.72■□□□□ 0.11
ATL1Q8WXF7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 AC063926.3-201ENST00000624734 5658 ntBASIC15.72■□□□□ 0.11
ATL1Q8WXF7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATL1Q8WXF7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms