Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 AC026396.1-201ENST00000419388 421 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 ACTL9-202ENST00000612068 1252 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 OR2I1P-210ENST00000642037 4691 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 IL9RP2-201ENST00000423948 1312 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 MYO15B-237ENST00000642007 4893 ntBASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTN4IP1Q8WWV3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 AC136621.1-201ENST00000624017 2304 ntBASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.58□□□□□ -0.23
RTN4IP1Q8WWV3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 AC104109.2-201ENST00000602919 1418 ntBASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 AC092919.2-201ENST00000623631 1645 ntBASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 AC145285.3-201ENST00000564603 959 ntBASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 AC012569.1-201ENST00000591191 1524 ntBASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTN4IP1Q8WWV3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTN4IP1Q8WWV3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms