Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16■□□□□ 0.15
CKAP2Q8WWK9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CKAP2Q8WWK9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CKAP2Q8WWK9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16■□□□□ 0.15
CKAP2Q8WWK9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CKAP2Q8WWK9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AP001282.1-201ENST00000531301 1499 ntBASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AL591684.3-201ENST00000605187 298 ntBASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CKAP2Q8WWK9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 WASH6P-202ENST00000359512 1437 ntBASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 AC093724.1-201ENST00000448659 1027 ntBASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 AC106795.1-205ENST00000512851 1056 ntBASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CKAP2Q8WWK9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKAP2Q8WWK9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms