Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM4Q8WVI0 OR2I1P-209ENST00000641730 5365 ntBASIC13.77□□□□□ -0.2
SMIM4Q8WVI0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM4Q8WVI0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM4Q8WVI0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM4Q8WVI0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM4Q8WVI0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
SMIM4Q8WVI0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 NSUN5P1-202ENST00000421140 1535 ntBASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 NSUN5P2-203ENST00000457352 1529 ntBASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 AC148477.4-201ENST00000613430 1793 ntBASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 AC073508.3-201ENST00000619697 1419 ntBASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM4Q8WVI0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AP001282.1-201ENST00000531301 1499 ntBASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AL671277.2-201ENST00000458060 996 ntBASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM4Q8WVI0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms