Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ARHGEF39Q8N4T4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 AC104794.3-201ENST00000566840 1248 ntBASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 MIR4313-201ENST00000580760 101 ntBASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ARHGEF39Q8N4T4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AL589987.1-201ENST00000453380 819 ntBASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 LINC01115-203ENST00000606068 577 ntBASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AL391069.4-201ENST00000609583 481 ntBASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 DOC2GP-204ENST00000639052 2548 ntBASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AC010491.1-201ENST00000563101 2797 ntBASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AL607033.1-201ENST00000623900 1599 ntBASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF39Q8N4T4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms