Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC134698.3-201ENST00000523880 214 ntBASIC10.96□□□□□ -0.65
CSMD3Q7Z407 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 EEF1DP1-201ENST00000585891 896 ntBASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AL133499.1-201ENST00000596207 608 ntBASIC10.96□□□□□ -0.65
CSMD3Q7Z407 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AC134407.2-201ENST00000625089 1978 ntBASIC10.96□□□□□ -0.65
CSMD3Q7Z407 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.96□□□□□ -0.65
CSMD3Q7Z407 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 RN7SL48P-201ENST00000579283 293 ntBASIC10.96□□□□□ -0.66
CSMD3Q7Z407 RN7SL574P-201ENST00000581512 297 ntBASIC10.96□□□□□ -0.66
CSMD3Q7Z407 AP000346.4-201ENST00000614827 381 ntBASIC10.96□□□□□ -0.66
CSMD3Q7Z407 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CSMD3Q7Z407 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AC015818.8-201ENST00000587907 1519 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AC005915.1-201ENST00000624912 2018 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 FTLP10-202ENST00000505798 471 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AC022211.2-201ENST00000585075 2527 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 PCDHA12-202ENST00000613593 2588 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 CNN2P10-201ENST00000443067 918 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AC015910.1-201ENST00000579400 975 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 CD8B2-202ENST00000417670 633 ntBASIC10.95□□□□□ -0.66
CSMD3Q7Z407 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CSMD3Q7Z407 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms