Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT4Q643R3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
LPCAT4Q643R3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT4Q643R3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT4Q643R3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 SLC22A20-204ENST00000530038 1673 ntBASIC15.19■□□□□ 0.02
LPCAT4Q643R3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 LIN28AP1-201ENST00000429574 405 ntBASIC15.19■□□□□ 0.02
LPCAT4Q643R3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT4Q643R3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 ST20-AS1-201ENST00000560255 4223 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SBF1P1-201ENST00000444527 5631 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AL596275.1-201ENST00000423464 877 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC091607.1-201ENST00000490318 1060 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC010203.1-204ENST00000548782 407 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 AL353135.1-201ENST00000606729 504 ntBASIC15.18■□□□□ 0.02
LPCAT4Q643R3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT4Q643R3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms