Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF3Q3KNV8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 AC087641.1-201ENST00000557561 1021 ntBASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCGF3Q3KNV8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 AC007326.2-201ENST00000624224 7579 ntBASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 AC211486.1-202ENST00000416371 468 ntBASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 AC140658.5-201ENST00000438532 169 ntBASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 AC211476.1-201ENST00000503899 468 ntBASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 YBX1P5-201ENST00000509441 847 ntBASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 MPDU1-223ENST00000582151 728 ntBASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF3Q3KNV8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 TNRC18P2-201ENST00000417666 2714 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 GGT3P-204ENST00000453783 1664 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 AC006058.4-201ENST00000624016 1670 ntBASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF3Q3KNV8 FAM58CP-201ENST00000435741 640 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms