Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 HAUS4P1-201ENST00000406739 1145 ntBASIC15.01□□□□□ -0.01
RFX4Q33E94 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX4Q33E94 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 HCG4P8-203ENST00000443049 980 ntBASIC15.01□□□□□ -0.01
RFX4Q33E94 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX4Q33E94 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX4Q33E94 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX4Q33E94 AC005412.3-201ENST00000580309 715 ntBASIC15.01□□□□□ -0.01
RFX4Q33E94 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.01□□□□□ -0.01
RFX4Q33E94 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RFX4Q33E94 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 AC005089.1-201ENST00000619486 2241 ntBASIC15.01□□□□□ -0.01
RFX4Q33E94 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 GRK6P1-201ENST00000400595 1711 ntBASIC15□□□□□ -0.01
RFX4Q33E94 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 AC129492.6-201ENST00000611383 1305 ntBASIC15□□□□□ -0.01
RFX4Q33E94 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15□□□□□ -0.01
RFX4Q33E94 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 AC107918.4-202ENST00000641623 219 ntBASIC15□□□□□ -0.01
RFX4Q33E94 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFX4Q33E94 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 CICP13-201ENST00000422015 2789 ntBASIC15□□□□□ -0.01
RFX4Q33E94 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15□□□□□ -0.01
RFX4Q33E94 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
RFX4Q33E94 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX4Q33E94 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RFX4Q33E94 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.99□□□□□ -0.01
RFX4Q33E94 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RFX4Q33E94 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.99□□□□□ -0.01
RFX4Q33E94 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.99□□□□□ -0.01
RFX4Q33E94 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.99□□□□□ -0.01
RFX4Q33E94 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX4Q33E94 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.99□□□□□ -0.01
RFX4Q33E94 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
RFX4Q33E94 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.99□□□□□ -0.01
RFX4Q33E94 RPS15P9-201ENST00000494093 319 ntBASIC14.99□□□□□ -0.01
RFX4Q33E94 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.99□□□□□ -0.01
RFX4Q33E94 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.99□□□□□ -0.01
RFX4Q33E94 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms