Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP46P62068 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
USP46P62068 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
USP46P62068 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.9■□□□□ 0.3
USP46P62068 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 AL691432.1-201ENST00000596308 1422 ntBASIC16.9■□□□□ 0.3
USP46P62068 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 AC015922.1-201ENST00000421102 1152 ntBASIC16.9■□□□□ 0.3
USP46P62068 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.9■□□□□ 0.3
USP46P62068 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.9■□□□□ 0.3
USP46P62068 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 SPDYE18-201ENST00000510091 1050 ntBASIC16.9■□□□□ 0.3
USP46P62068 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.9■□□□□ 0.3
USP46P62068 ZNF890P-202ENST00000530367 1156 ntBASIC16.9■□□□□ 0.3
USP46P62068 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
USP46P62068 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.9■□□□□ 0.3
USP46P62068 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.9■□□□□ 0.3
USP46P62068 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.9■□□□□ 0.3
USP46P62068 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
USP46P62068 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP46P62068 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
USP46P62068 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
USP46P62068 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
USP46P62068 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
USP46P62068 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USP46P62068 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
USP46P62068 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.89■□□□□ 0.29
USP46P62068 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.89■□□□□ 0.29
USP46P62068 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP46P62068 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 AC135586.1-201ENST00000539323 574 ntBASIC16.89■□□□□ 0.29
USP46P62068 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.89■□□□□ 0.29
USP46P62068 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.89■□□□□ 0.29
USP46P62068 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.89■□□□□ 0.29
USP46P62068 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.89■□□□□ 0.29
USP46P62068 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
USP46P62068 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP46P62068 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.89■□□□□ 0.29
USP46P62068 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
USP46P62068 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.89■□□□□ 0.29
USP46P62068 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms