Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.67■□□□□ 0.42
PMS1P54277 MIR4313-201ENST00000580760 101 ntBASIC17.67■□□□□ 0.42
PMS1P54277 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 AC024267.1-201ENST00000582320 895 ntBASIC17.67■□□□□ 0.42
PMS1P54277 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.67■□□□□ 0.42
PMS1P54277 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.67■□□□□ 0.42
PMS1P54277 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 REXO1L1P-202ENST00000608646 1974 ntBASIC17.67■□□□□ 0.42
PMS1P54277 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PMS1P54277 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PMS1P54277 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.66■□□□□ 0.42
PMS1P54277 RPS8P6-201ENST00000426177 609 ntBASIC17.66■□□□□ 0.42
PMS1P54277 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PMS1P54277 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.66■□□□□ 0.42
PMS1P54277 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.66■□□□□ 0.42
PMS1P54277 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.66■□□□□ 0.42
PMS1P54277 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.66■□□□□ 0.42
PMS1P54277 AC084121.4-201ENST00000641598 221 ntBASIC17.66■□□□□ 0.42
PMS1P54277 AF228730.8-201ENST00000642140 221 ntBASIC17.66■□□□□ 0.42
PMS1P54277 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.66■□□□□ 0.42
PMS1P54277 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMS1P54277 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PMS1P54277 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.65■□□□□ 0.42
PMS1P54277 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.65■□□□□ 0.42
PMS1P54277 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.65■□□□□ 0.42
PMS1P54277 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 AC243562.2-201ENST00000561247 970 ntBASIC17.65■□□□□ 0.42
PMS1P54277 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PMS1P54277 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PMS1P54277 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms